Ruriko Yoshida

Computational Challenges

Lattice Point Enumeration

• Source code for LattE
• A Fairground Game Problem introduced by Atkinson and Haigh.

Neighbor Joining Method with Subtree Weights

• Source code for MJOIN
• Tree Model introduced by Strimmer and von Haeseler.

MRCALink statistical analysis for coevolution

• Source code for MRCALink
• MRCALink statistical analysis for plants and endophytes.

MultiLocus Phylogenetic Analysis with Gene Tree Clustering

• Link for the supplementary materials.

Convexity in treespaces

• Link for the supplementary materials.

Tropical PCA

• Link for the supplementary materials.